Solyc05g040050.3.1 (Solyc05g040050)


Aliases : Solyc05g040050

Description : no hits & (original description: none)


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g040050.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 OrthoFinder output from all 47 species
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 OrthoFinder output from all 47 species
AT3G06340 No alias DNAJ heat shock N-terminal domain-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g079764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20912.t1 Aspi01Gene20912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21685.t1 Aspi01Gene21685 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27467.t1 Aspi01Gene27467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66629.t1 Aspi01Gene66629 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.03 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.06 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028708001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g31940.1 LOC_Os04g31940 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g02170.1 LOC_Os06g02170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g34440.1 LOC_Os06g34440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g13912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_96489g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03986 No alias chaperone component *(SDJ) of SUVH-SDJ methylation... 0.02 OrthoFinder output from all 47 species
Ppi_g05305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g067780.1.1 Solyc01g067780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g019640.1.1 Solyc03g019640 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g08821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 445 651
IPR001623 DnaJ_domain 66 127
No external refs found!