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  5. Solyc05g024310.1.1

Solyc05g024310.1.1 (Solyc05g024310)


Aliases : Solyc05g024310

Description : no hits & (original description: none)


Gene families : OG0000208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g024310.1.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT4G34230 CAD5, ATCAD5, CAD-5 cinnamyl alcohol dehydrogenase 5 0.03 OrthoFinder output from all 47 species
Adi_g019642 ATCAD9, CAD9 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Adi_g052726 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Adi_g078082 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ala_g10725 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23149.t1 ATCAD9, CAD9,... EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g15889 ELI3-2, ATCAD8,... EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Cba_g76450 ATCAD9, CAD9 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
MA_10432110g0010 ATCAD9, CAD9 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
MA_9417966g0010 ATCAD9, CAD9 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
Nbi_g13430 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Pir_g66083 CAD1, ATCAD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Solyc02g069250.4.1 ATCAD9, CAD9,... Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc11g011340.2.1 ELI3-2, ATCAD8,... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!