1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g018810.4.1

Solyc05g018810.4.1 (NFA02, NFA2, NAP1;2,...)


Aliases : NFA02, NFA2, NAP1;2, Solyc05g018810

Description : histone chaperone (NAP)


Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g018810.4.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Adi_g008945 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008946 NFA03, NFA3, NAP1;3 histone chaperone *(NAP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078522 NFA02, NFA2, NAP1;2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102779 NFA02, NFA2, NAP1;2 histone chaperone *(NAP) & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g073550 No alias Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Cre09.g416350 NFA02, NFA2, NAP1;2 Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Gb_12103 NFA03, NFA3, NAP1;3 histone chaperone (NAP) 0.03 OrthoFinder output from all 47 species
Gb_41264 ATNAP1;1, NAP1;1 histone chaperone (NAP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g05660.1 NFA02, NFA2,... histone chaperone (NAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002164 NAP_family 53 298
No external refs found!