1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g017860.3.1

Solyc05g017860.3.1 (Solyc05g017860)


Aliases : Solyc05g017860

Description : phosphatidylinositol 3,5-bisphosphate biosynthesis scaffold protein (VAC14)


Gene families : OG0002990 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002990_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g017860.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Adi_g108120 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Aev_g06764 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.02 OrthoFinder output from all 47 species
Aev_g07980 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Ala_g02512 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Als_g15717 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.05 OrthoFinder output from all 47 species
Als_g23099 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Aob_g42728 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.05 OrthoFinder output from all 47 species
Aop_g13931 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51130.t1 Aspi01Gene51130 phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Azfi_s0335.g065521 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.05 OrthoFinder output from all 47 species
Ceric.15G013700.1 Ceric.15G013700 phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.08 OrthoFinder output from all 47 species
Cre16.g670261 No alias Protein VAC14 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g03116 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.06 OrthoFinder output from all 47 species
GSVIVT01011664001 No alias Protein VAC14 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g12300.1 LOC_Os03g12300 phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.04 OrthoFinder output from all 47 species
Len_g03367 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Lfl_g02306 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.08 OrthoFinder output from all 47 species
MA_65576g0010 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.02 OrthoFinder output from all 47 species
Mp5g12640.1 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Pir_g18988 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.03 OrthoFinder output from all 47 species
Smo172660 No alias Protein VAC14 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g05192 No alias phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.04 OrthoFinder output from all 47 species
Zm00001e000881_P005 Zm00001e000881 phosphatidylinositol 3,5-bisphosphate biosynthesis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021841 VAC14_Fig4p-bd 431 610
No external refs found!