- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc05g014200
Description : TNO1 vesicle trafficking tethering factor
Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc05g014200.3.1 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00254550 | evm_27.TU.AmTr_v1... | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00185400 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G24460 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.05 | OrthoFinder output from all 47 species | |
| AT4G31570 | No alias | CONTAINS InterPro DOMAIN/s: Prefoldin... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g011988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30321 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Ala_g14350 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g22595 | No alias | vesicle trafficking tethering factor *(TNO1) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0154.g053538 | No alias | not classified & original description: CDS=266-7378 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G031700.1 | Ceric.15G031700 | not classified & original description: pacid=50639891... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08332 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g10094 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01716 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010295001 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033178001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01033179001 | No alias | COP1-interactive protein 1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_40009 | No alias | TNO1 vesicle trafficking tethering factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g38480.1 | LOC_Os02g38480 | TNO1 vesicle trafficking tethering factor | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07858 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| MA_10430492g0030 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431592g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432450g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_167448g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_4333439g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25758 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07081 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17495 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g17797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013662_P003 | Zm00001e013662 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015026_P001 | Zm00001e015026 | TNO1 vesicle trafficking tethering factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007030 | Golgi organization | IEP | HCCA |
| MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |