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  5. Solyc05g013930.2.1

Solyc05g013930.2.1 (TEL1, Solyc05g013930)


Aliases : TEL1, Solyc05g013930

Description : Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0)


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013930.2.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.1 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.08 OrthoFinder output from all 47 species
AT3G26120 TEL1 terminal EAR1-like 1 0.03 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.08 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54244.t1 TEL1, Aspi01Gene54244 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042632 TEL1 not classified & original description: CDS=1-3177 0.06 OrthoFinder output from all 47 species
Azfi_s0383.g067442 TEL1 not classified & original description: CDS=310-3381 0.03 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.06 OrthoFinder output from all 47 species
Dac_g14075 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16392 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20398 TEL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003988001 TEL1 Protein terminal ear1 OS=Zea mays 0.1 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_21853 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.04 OrthoFinder output from all 47 species
Gb_33381 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 198.0) 0.04 OrthoFinder output from all 47 species
LOC_Os01g68000.1 TEL1, LOC_Os01g68000 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
LOC_Os09g36140.1 TEL1, LOC_Os09g36140 Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_477594g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_68449g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006958 TEL1 not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008917 TEL1 not classified & original description: CDS=1-2472 0.04 OrthoFinder output from all 47 species
Spa_g12309 TEL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39479 TEL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44662 TEL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 435 545
IPR000504 RRM_dom 205 269
No external refs found!