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  5. Solyc05g013340.3.1

Solyc05g013340.3.1 (HAP13, Solyc05g013340)


Aliases : HAP13, Solyc05g013340

Description : medium subunit mu of AP-1 trans-Golgi network cargo adaptor complex


Gene families : OG0003200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013340.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00250090 HAP13,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
AT1G60780 HAP13 Clathrin adaptor complexes medium subunit family protein 0.05 OrthoFinder output from all 47 species
Adi_g074255 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Aev_g12966 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Aob_g03410 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Aop_g02146 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020466 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Azfi_s0069.g036494 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Cba_g06963 HAP13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.5 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Cre06.g262250 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
Dcu_g08796 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Ehy_g19498 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
GSVIVT01004093001 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.11 OrthoFinder output from all 47 species
LOC_Os05g46550.1 HAP13, LOC_Os05g46550 medium subunit mu of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Lfl_g06990 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
MA_640862g0010 HAP13 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp1g15960.1 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Msp_g12532 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Nbi_g02172 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ppi_g03776 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Sam_g09529 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Smo91068 HAP13 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Tin_g03338 HAP13 medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e020037_P003 HAP13, Zm00001e020037 AP-1 complex subunit mu-2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 9 129
IPR028565 MHD 157 424
No external refs found!