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  5. Solyc05g011830.4.1

Solyc05g011830.4.1 (Solyc05g011830)


Aliases : Solyc05g011830

Description : no hits & (original description: none)


Gene families : OG0001861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g011830.4.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cba_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G066400.1 Ceric.05G066400 not classified & original description: pacid=50579078... 0.06 OrthoFinder output from all 47 species
Dcu_g01826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014949_P001 Zm00001e014949 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!