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  5. Solyc05g010540.2.1

Solyc05g010540.2.1 (Solyc05g010540)


Aliases : Solyc05g010540

Description : no hits & (original description: none)


Gene families : OG0012650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g010540.2.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Solyc06g068630.4.1 Solyc06g068630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g079580.1.1 Solyc08g079580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g082510.1.1 Solyc08g082510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005174 DUF295 170 228
No external refs found!