1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g010425.1.1

Solyc05g010425.1.1 (Solyc05g010425)


Aliases : Solyc05g010425

Description : no hits & (original description: none)


Gene families : OG0007921 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007921_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g010425.1.1
Cluster HCCA: Cluster_409

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00109600 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g066388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29179 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g60836 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g54589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61165.t1 Aspi01Gene61165 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08615 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.15G068800.1 Ceric.15G068800 not classified & original description: pacid=50640865... 0.04 OrthoFinder output from all 47 species
Ceric.34G041300.1 Ceric.34G041300 not classified & original description: pacid=50622755... 0.02 OrthoFinder output from all 47 species
Dac_g17742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429775g0040 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434945g0030 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_75633g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g19070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31134 CCR2, ATGRP7,... component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Solyc02g150147.1.1 Solyc02g150147 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Spa_g13396 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012511 AdoMetDC_leader 18 68
No external refs found!