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  5. Solyc05g009020.4.1

Solyc05g009020.4.1 (ATNDT2, NDT2, Solyc05g009020)


Aliases : ATNDT2, NDT2, Solyc05g009020

Description : solute transporter (MTCC)


Gene families : OG0002510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009020.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g056928 ATNDT2, NDT2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028063001 ATNDT1, NDT1 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Lfl_g25575 ATNDT1, NDT1 solute transporter *(MTCC) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017165 ATNDT1, NDT1 solute transporter *(MTCC) & original description: CDS=198-1259 0.03 OrthoFinder output from all 47 species
Sam_g38234 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 1 76
IPR018108 Mitochondrial_sb/sol_carrier 84 175
IPR018108 Mitochondrial_sb/sol_carrier 187 277
No external refs found!