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  5. Solyc05g008080.3.1

Solyc05g008080.3.1 (NIP4;2, NLM5, Solyc05g008080)


Aliases : NIP4;2, NLM5, Solyc05g008080

Description : Nodulin-26-like intrinsic protein (NIP)


Gene families : OG0000311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008080.3.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g03704 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g13870.1 NIP1;2, NLM2,... Nodulin-26-like intrinsic protein (NIP) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014809 NIP6, NIP6;1, NLM7 Nodulin-26-like intrinsic protein *(NIP) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 37 244
No external refs found!