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Aliases : Solyc05g007810
Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 154.0)
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00265700 | evm_27.TU.AmTr_v1... | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00221750 | evm_27.TU.AmTr_v1... | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008962 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g012562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022420 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054731 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108369 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03129 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g09611 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17355 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17642 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g24288 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G027100.1 | Ceric.25G027100 | not classified & original description: pacid=50594480... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G061200.1 | Ceric.32G061200 | not classified & original description: pacid=50597564... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22559 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03944 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g11172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07829 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g09896 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011439001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012514001 | HEN4 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Gb_03724 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31686 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38220 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g23460.1 | LOC_Os06g23460 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g10030.1 | LOC_Os08g10030 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18926 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g19668 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g36497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02093 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429211g0010 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430861g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3715g0020 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| MA_6622g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_71572g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10485 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g12132 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g34355 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03833 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06772 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10011 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10012 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40850 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02549 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09567 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g37389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08848 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g14000 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g18424 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16334 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g08472 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13844 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16383 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g077060.3.1 | Solyc04g077060 | RNA-binding KH domain-containing protein RCF3... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26299 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39448 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g02804 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g36753 | PEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004486_P005 | Zm00001e004486 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037033_P001 | Zm00001e037033 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039986_P003 | Zm00001e039986 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006470 | protein dephosphorylation | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |