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Aliases : Solyc04g081370
Description : C2H2 zinc finger transcription factor
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g081370.2.1 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G75710 | No alias | C2H2-like zinc finger protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G29660 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G54630 | No alias | zinc finger protein-related | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12232 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063895 | No alias | not classified & original description: CDS=1048-1284 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G019700.1 | Ceric.17G019700 | not classified & original description: pacid=50618170... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01004470001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008925001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014576001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024778001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_08005 | No alias | C2H2 zinc finger transcription factor. sugar efflux... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30270 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g57650.1 | LOC_Os01g57650 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g02510.1 | LOC_Os04g02510 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14097 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_103943g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g21490.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023140 | No alias | not classified & original description: CDS=905-2272 | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019606_P002 | Zm00001e019606 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024498_P001 | Zm00001e024498 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |