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  5. Solyc04g079960.1.1

Solyc04g079960.1.1 (GGPS1, Solyc04g079960)


Aliases : GGPS1, Solyc04g079960

Description : catalytic subunit of geranyl diphosphate synthase complex. isoprenyl diphosphate synthase


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g079960.1.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G49530 GGPS6 geranylgeranyl pyrophosphate synthase 6 0.05 OrthoFinder output from all 47 species
AT2G18620 No alias Terpenoid synthases superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G18640 GGPS4 geranylgeranyl pyrophosphate synthase 4 0.03 OrthoFinder output from all 47 species
AT3G32040 No alias Terpenoid synthases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g046337 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Adi_g046342 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aop_g14662 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dac_g17913 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g14630.1 GGPS1, LOC_Os01g14630 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
MA_138828g0010 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
MA_895626g0010 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Pir_g10074 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330td>EC_2.5 transferase transferring alkyl or aryl group,... monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 98 327
No external refs found!