Aliases : Solyc04g078850
Description : Protein DCL, chloroplastic OS=Solanum lycopersicum (sp|q42463|dcl_sollc : 374.0)
Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g078850.4.1 | |
Cluster | HCCA: Cluster_133 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00091p00170630 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
AT3G46630 | No alias | Protein of unknown function (DUF3223) | 0.02 | OrthoFinder output from all 47 species | |
Aob_g07047 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_04575 | No alias | Protein DCL homolog, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g52744.1 | LOC_Os02g52744 | Protein DCL, chloroplastic OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g21700.1 | LOC_Os08g21700 | Protein DCL, chloroplastic OS=Solanum lycopersicum... | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g09324 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000643_P001 | Zm00001e000643 | Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023814_P002 | Zm00001e023814 | Protein DCL, chloroplastic OS=Solanum lycopersicum... | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |