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Aliases : WLIM1, Solyc04g077780
Description : transcription factor (LIM)
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00259550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00168710 | WLIM1,... | RNA biosynthesis.transcriptional activation.LIM... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G10200 | WLIM1 | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39900 | No alias | GATA type zinc finger transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G55770 | No alias | GATA type zinc finger transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g050018 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g22808 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07996 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g49721 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06316 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g65927 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G035600.1 | WLIM1, Ceric.14G035600 | LIM-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13344 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03324 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007812001 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11447 | WLIM1 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g02687 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57701 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01071 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04562 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g41003 | No alias | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e018310_P001 | WLIM1, Zm00001e018310 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| No external refs found! |