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Aliases : Solyc04g072830
Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana (sp|b6sfa4|maa3_arath : 242.0)
Gene families : OG0001977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001977_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g072830.4.1 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00119p00113390 | evm_27.TU.AmTr_v1... | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT4G30100 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g08028 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g29338 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09084 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.35G070300.1 | Ceric.35G070300 | not classified & original description: pacid=50580926... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g19075 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009001001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g13066 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g33272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_88596g0010 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g14754 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01517 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g38225 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015852 | No alias | not classified & original description: CDS=187-4857 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g29974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50558 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012950_P003 | Zm00001e012950 | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |