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  5. Solyc04g072700.4.1

Solyc04g072700.4.1 (Solyc04g072700)


Aliases : Solyc04g072700

Description : Heavy metal-associated isoprenylated plant protein 24 OS=Arabidopsis thaliana (sp|o81464|hip24_arath : 171.0)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072700.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00214870 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
AMTR_s00034p00190630 NAKR2,... Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G35060 HIPP25 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G17450 HIPP21 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g12214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G003200.1 Ceric.07G003200 not classified & original description: pacid=50628015... 0.03 OrthoFinder output from all 47 species
Ceric.10G055100.1 Ceric.10G055100 not classified & original description: pacid=50611673... 0.02 OrthoFinder output from all 47 species
Ceric.13G074300.1 Ceric.13G074300 not classified & original description: pacid=50635247... 0.05 OrthoFinder output from all 47 species
Dde_g20149 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g55320.1 LOC_Os01g55320 Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
LOC_Os05g45820.1 LOC_Os05g45820 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g39758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17167 HIPP20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024693 No alias not classified & original description: CDS=1-390 0.02 OrthoFinder output from all 47 species
Solyc02g091300.3.1 HIPP21, Solyc02g091300 Heavy metal-associated isoprenylated plant protein 20... 0.06 OrthoFinder output from all 47 species
Spa_g54655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e014717_P001 CCH, Zm00001e014717 copper chaperone (CCH) 0.02 OrthoFinder output from all 47 species
Zm00001e017654_P001 NAKR1, Zm00001e017654 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029113_P001 HIPP20, Zm00001e029113 Heavy metal-associated isoprenylated plant protein 20... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 32 87
No external refs found!