Solyc04g072560.3.1 (Solyc04g072560)

Aliases : Solyc04g072560

Description : no hits & (original description: none)

Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g072560.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00238960	OPCL1,...	Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase	0.04	OrthoFinder output from all 47 species
AMTR_s00002p00106850	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00003p00244140	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00237800	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00036p00232910	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
Adi_g054726	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.05	OrthoFinder output from all 47 species
Adi_g056914	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Ala_g04603	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Ala_g17659	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g33972	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Azfi_s0054.g033701	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.05	OrthoFinder output from all 47 species
Azfi_s0124.g048464	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.04	OrthoFinder output from all 47 species
Cba_g03263	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Cba_g15528	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Ceric.04G112400.1	Ceric.04G112400	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000227.28	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cre10.g435400	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dac_g14035	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Dac_g23362	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Dac_g43865	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Dcu_g01980	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.06	OrthoFinder output from all 47 species
Dcu_g08275	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.04	OrthoFinder output from all 47 species
Dde_g09640	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015242001	No alias	No description available	0.05	OrthoFinder output from all 47 species
LOC_Os01g51010.1	LOC_Os01g51010	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os08g07830.1	LOC_Os08g07830	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Len_g01902	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Len_g40975	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Len_g58366	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g59871	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Lfl_g01766	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.06	OrthoFinder output from all 47 species
Mp3g09120.1	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Msp_g31103	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.04	OrthoFinder output from all 47 species
Msp_g38957	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Msp_g48877	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.05	OrthoFinder output from all 47 species
Nbi_g01070	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Ore_g16519	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Pir_g57218	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Ppi_g09496	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023198	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Sam_g07325	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.05	OrthoFinder output from all 47 species
Sam_g07326	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g35772	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Smo66879	No alias	No description available	0.03	OrthoFinder output from all 47 species
Spa_g22531	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Tin_g07646	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorTing &...	0.04	OrthoFinder output from all 47 species
Zm00001e021674_P001	Zm00001e021674	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
BP	GO:0017003	protein-heme linkage	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005061	Ist1	15	178

External Links

No external refs found!

Solyc04g072560.3.1 (Solyc04g072560)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation