Solyc04g071160.3.1 (SUE3, VIP1, Solyc04g071160)

Aliases : SUE3, VIP1, Solyc04g071160

Description : transcription factor (bZIP)

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g071160.3.1
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00190730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.04	OrthoFinder output from all 47 species
AT1G43700	SUE3, VIP1	VIRE2-interacting protein 1	0.02	OrthoFinder output from all 47 species
Adi_g077163	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g06005	No alias	bZIP class-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g08187	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17398	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31324.t1	Aspi01Gene31324	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03942	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g78042	ATBZIP61, BZIP61	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G057800.1	Ceric.18G057800	bZIP class-I transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g03872	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g07611	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g03394	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28477	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09495	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g02436	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g11626	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g01054	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001113	No alias	bZIP class-I transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005801	No alias	bZIP class-I transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g18152	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g103873.1.1	Solyc01g103873	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Spa_g22042	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54986	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000201_P001	Zm00001e000201	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Zm00001e018460_P001	SUE3, VIP1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Zm00001e024638_P002	SUE3, VIP1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	184	242

External Links

No external refs found!

Solyc04g071160.3.1 (SUE3, VIP1, Solyc04g071160)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation