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  5. Solyc04g058160.2.1

Solyc04g058160.2.1 (Solyc04g058160)


Aliases : Solyc04g058160

Description : Probable calcium-binding protein CML44 OS=Arabidopsis thaliana (sp|q9lpk5|cml44_arath : 107.0)


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g058160.2.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00177420 CML43,... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00121p00130840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00316p00011560 UNE14,... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s01571p00001870 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s02547p00008880 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G03290 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
Adi_g051954 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05860 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12844 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34766 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37168 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04699 CML42 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20304 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03447 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27813 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33734 UNE14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24593 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39505 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70312 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06369.t1 Aspi01Gene06369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34652.t1 CML42, Aspi01Gene34652 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34666.t1 UNE14, Aspi01Gene34666 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34906.t1 UNE14, Aspi01Gene34906 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57526.t1 CML43, Aspi01Gene57526 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64179.t1 CML43, Aspi01Gene64179 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64184.t1 Aspi01Gene64184 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.02 OrthoFinder output from all 47 species
Ceric.25G037500.1 CML42, Ceric.25G037500 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g12957 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17897 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34789 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00701 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03398 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22617 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37155 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015585001 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_28442 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_30178 UNE14 Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os05g24780.1 CML42, LOC_Os05g24780 Probable calcium-binding protein CML21 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os08g04890.1 CML42, LOC_Os08g04890 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23777 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432950g0010 CML41 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_18054g0010 CML43 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_269415g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_641437g0010 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_8749g0010 CML43 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g10070.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g18000.1 UNE14 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g20440.1 CML42 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Msp_g42557 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10478 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08285 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014239 UNE14 not classified & original description: CDS=1-1101 0.02 OrthoFinder output from all 47 species
Sam_g03755 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49929 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12245 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12491 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 89 153
IPR002048 EF_hand_dom 9 35
No external refs found!