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  5. Solyc04g050240.3.1

Solyc04g050240.3.1 (VPS26B, Solyc04g050240)


Aliases : VPS26B, Solyc04g050240

Description : component VPS26 of Retromer protein recycling complex


Gene families : OG0003204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g050240.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Als_g03641 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Ceric.13G082100.1 VPS26B, Ceric.13G082100 component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Ceric.1Z146600.1 VPS26B, Ceric.1Z146600 component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Cre09.g414200 VPS26B Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g02603 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Gb_01256 VPS26B component VPS26 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species
Mp1g01930.1 VPS26B component VPS26 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species
Pir_g09444 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Spa_g00931 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.03 OrthoFinder output from all 47 species
Tin_g04992 VPS26B component *(VPS26) of Retromer protein recycling complex... 0.02 OrthoFinder output from all 47 species
Zm00001e011074_P002 VPS26B, Zm00001e011074 component VPS26 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR028934 Vps26-related 8 283
No external refs found!