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  5. Solyc04g049910.4.1

Solyc04g049910.4.1 (NF-YB10, Solyc04g049910)


Aliases : NF-YB10, Solyc04g049910

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g049910.4.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Adi_g021371 NF-YB8 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Adi_g104650 NF-YB6, L1L transcription factor *(LEC) involved in seed maturation... 0.03 OrthoFinder output from all 47 species
Aev_g03834 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.09 OrthoFinder output from all 47 species
Als_g14068 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aob_g24055 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01025110001 NF-YB8 RNA biosynthesis.transcriptional activation.NF-Y... 0.05 OrthoFinder output from all 47 species
LOC_Os05g38820.4 NF-YB3, LOC_Os05g38820 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Lfl_g39312 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Pir_g11596 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Spa_g46402 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Zm00001e035517_P001 NF-YB3, Zm00001e035517 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 32 96
No external refs found!