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  5. Solyc04g024500.3.1

Solyc04g024500.3.1 (Solyc04g024500)


Aliases : Solyc04g024500

Description : no hits & (original description: none)


Gene families : OG0005591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g024500.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00098040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ceric.23G018400.1 Ceric.23G018400 component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.04 OrthoFinder output from all 47 species
Dcu_g05481 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.05 OrthoFinder output from all 47 species
Msp_g12251 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.04 OrthoFinder output from all 47 species
Zm00001e018372_P002 Zm00001e018372 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!