1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g015120.3.1

Solyc04g015120.3.1 (Solyc04g015120)


Aliases : Solyc04g015120

Description : no hits & (original description: none)


Gene families : OG0003233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g015120.3.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268690 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ceric.12G007900.1 Ceric.12G007900 not classified & original description: pacid=50601665... 0.03 OrthoFinder output from all 47 species
LOC_Os06g18820.1 LOC_Os06g18820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g10867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008568 No alias not classified & original description: CDS=584-1549 0.02 OrthoFinder output from all 47 species
Sam_g09508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!