Solyc04g010210.1.1 (Solyc04g010210)

Aliases : Solyc04g010210

Description : subfamily ABCG transporter

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g010210.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G53270	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
AT2G37360	No alias	ABC-2 type transporter family protein	0.07	OrthoFinder output from all 47 species
AT3G53510	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT3G55090	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT3G55100	No alias	ABC-2 type transporter family protein	0.13	OrthoFinder output from all 47 species
AT3G55110	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT4G25750	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT5G13580	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
AT5G19410	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
Adi_g113805	No alias	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene05499.t1	Aspi01Gene05499	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g17500	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g08003	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g23513	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.08	OrthoFinder output from all 47 species
Gb_20468	No alias	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Gb_24085	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g42900.1	LOC_Os01g42900	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_103974g0010	No alias	ABC transporter G family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10426701g0030	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10432886g0010	No alias	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
MA_529254g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Mp2g07990.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Mp3g16700.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Smo84236	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo88976	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc03g113690.1.1	Solyc03g113690	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc09g005970.1.1	Solyc09g005970	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Tin_g11561	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g44760	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e020697_P001	Zm00001e020697	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	411	618
IPR003439	ABC_transporter-like_ATP-bd	105	257

External Links

No external refs found!

Solyc04g010210.1.1 (Solyc04g010210)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation