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Aliases : GIF1, GIF, ATGIF1, AN3, Solyc04g009820
Description : cofactor component GIF of GRF-GIF transcriptional complex
Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g009820.3.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00121p00019250 | GIF3,... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G01160 | GIF2 | GRF1-interacting factor 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G28640 | GIF1, GIF, ATGIF1, AN3 | SSXT family protein | 0.1 | OrthoFinder output from all 47 species | |
| Als_g08181 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03435 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008015 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G051000.1 | GIF3, Ceric.29G051000 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| MA_137340g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c13_2290V3.1 | GIF3, Pp3c13_2290 | GRF1-interacting factor 3 | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g009280.4.1 | GIF3, Solyc10g009280 | cofactor component GIF of GRF-GIF transcriptional complex | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g46790 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005583_P001 | GIF1, GIF,... | cofactor component GIF of GRF-GIF transcriptional complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003713 | transcription coactivator activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007726 | SS18_N | 19 | 77 |
| No external refs found! |