1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g008730.3.1

Solyc04g008730.3.1 (AGAL1, AtAGAL1, Solyc04g008730)


Aliases : AGAL1, AtAGAL1, Solyc04g008730

Description : Alpha-galactosidase 1 OS=Arabidopsis thaliana (sp|q9ft97|agal1_arath : 645.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 204.9)


Gene families : OG0000574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000574_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008730.3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00246680 AGAL2, AtAGAL2,... Alpha-galactosidase 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Aev_g05202 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01189 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30802 AGAL1, AtAGAL1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g35110.2 AGAL2, AtAGAL2,... Alpha-galactosidase OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_54403g0020 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g02025 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21752 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR041233 Melibiase_C 337 414
IPR002241 Glyco_hydro_27 61 325
No external refs found!