Solyc04g007240.1.1 (ATIPT1, IPT1, Solyc04g007240)

Aliases : ATIPT1, IPT1, Solyc04g007240

Description : adenylate isopentenyltransferase

Gene families : OG0001266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001266_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g007240.1.1
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00098050	IPT2, ATIPT2,...	Enzyme classification.EC_2 transferases.EC_2.5...	0.06	OrthoFinder output from all 47 species
AT3G63110	ATIPT3, IPT3	isopentenyltransferase 3	0.03	OrthoFinder output from all 47 species
GSVIVT01011886001	ATIPT1, IPT1	Phytohormones.cytokinin.synthesis.adenylate...	0.05	OrthoFinder output from all 47 species
GSVIVT01025775001	IPT5, ATIPT5	Phytohormones.cytokinin.synthesis.adenylate...	0.06	OrthoFinder output from all 47 species
LOC_Os03g59570.1	IPT5, ATIPT5,...	adenylate isopentenyltransferase	0.05	OrthoFinder output from all 47 species
LOC_Os05g47840.1	ATIPT1, IPT1,...	adenylate isopentenyltransferase	0.03	OrthoFinder output from all 47 species
MA_20274g0010	IPT2, ATIPT2, IPPT	Enzyme classification.EC_2 transferases.EC_2.5...	0.02	OrthoFinder output from all 47 species
Solyc11g020360.3.1	ATIPT3, IPT3,...	Enzyme classification.EC_2 transferases.EC_2.5...	0.01	OrthoFinder output from all 47 species
Solyc11g061830.1.1	IPT7, ATIPT7,...	Enzyme classification.EC_2 transferases.EC_2.5...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018022	IPT	79	157
IPR018022	IPT	169	266

External Links

No external refs found!