Solyc04g005500.3.1 (Solyc04g005500)


Aliases : Solyc04g005500

Description : no hits & (original description: none)


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g005500.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G13940 No alias Plant protein of unknown function (DUF863) 0.08 OrthoFinder output from all 47 species
AT1G26620 No alias Plant protein of unknown function (DUF863) 0.03 OrthoFinder output from all 47 species
AT5G07790 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g059426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G017200.1 Ceric.29G017200 not classified & original description: pacid=50625875... 0.06 OrthoFinder output from all 47 species
Dac_g12935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012173001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g08361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18633 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007141 No alias not classified & original description: CDS=1534-4596 0.03 OrthoFinder output from all 47 species
Sam_g12580 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo438604 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g51390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR008581 DUF863_pln 124 1033
No external refs found!