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  5. Solyc03g123700.4.1

Solyc03g123700.4.1 (Solyc03g123700)


Aliases : Solyc03g123700

Description : no hits & (original description: none)


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g123700.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00138820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G53800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.16 OrthoFinder output from all 47 species
Adi_g023497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010108 No alias not classified & original description: CDS=68-1096 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035636 No alias not classified & original description: CDS=28-522 0.04 OrthoFinder output from all 47 species
Azfi_s0066.g036090 No alias not classified & original description: CDS=173-1813 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065792 No alias not classified & original description: CDS=123-1853 0.06 OrthoFinder output from all 47 species
Cba_g09085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G079500.1 Ceric.21G079500 not classified & original description: pacid=50604458... 0.08 OrthoFinder output from all 47 species
Dac_g20282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01308 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01014224001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01016660001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_18962 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_24726 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g12354.1 LOC_Os10g12354 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g14879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_643462g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g14930.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g11885 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g42536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001251 No alias not classified & original description: CDS=64-1719 0.03 OrthoFinder output from all 47 species
Sam_g28963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006550_P001 Zm00001e006550 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e032593_P001 Zm00001e032593 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003611 NUMOD3 126 152
No external refs found!