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  5. Solyc03g123380.1.1

Solyc03g123380.1.1 (Solyc03g123380)


Aliases : Solyc03g123380

Description : no hits & (original description: none)


Gene families : OG0002235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g123380.1.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00224270 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00045p00228470 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s02918p00001350 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G21180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
AT3G06890 No alias unknown protein; Has 91 Blast hits to 91 proteins in 12... 0.03 OrthoFinder output from all 47 species
Aev_g20250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69114.t1 Aspi01Gene69114 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G072700.1 Ceric.12G072700 not classified & original description: pacid=50602480... 0.04 OrthoFinder output from all 47 species
Gb_17861 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14570.1 LOC_Os03g14570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10510.1 LOC_Os06g10510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47660.1 LOC_Os07g47660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g03072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_216359g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g18333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015345 No alias not classified & original description: CDS=1-375 0.03 OrthoFinder output from all 47 species
Solyc12g099500.2.1 Solyc12g099500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001624_P001 Zm00001e001624 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016013_P001 Zm00001e016013 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!