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  5. Solyc03g122030.1.1

Solyc03g122030.1.1 (Solyc03g122030)


Aliases : Solyc03g122030

Description : transcription factor (Trihelix)


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc03g122030.1.1

Target Alias Description ECC score Gene Family Method Actions
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 OrthoFinder output from all 47 species
GSVIVT01017112001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
LOC_Os01g52090.1 LOC_Os01g52090 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Mp7g06290.1 No alias transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
Mp7g12800.1 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Nbi_g12848 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c7_24030V3.1 Pp3c7_24030 sequence-specific DNA binding transcription factors 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0043486 obsolete histone exchange IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!