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  5. Solyc03g121950.3.1

Solyc03g121950.3.1 (CID4, Solyc03g121950)


Aliases : CID4, Solyc03g121950

Description : Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana (sp|q94am9|cid4_arath : 321.0)


Gene families : OG0002546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121950.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g022441 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18076 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1680.g105668 CID3 not classified & original description: CDS=419-2980 0.03 OrthoFinder output from all 47 species
Gb_36727 CID4 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Mp7g15450.1 CID4 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Pir_g05846 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22540 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR025852 SM_dom_ATX 55 138
IPR009604 LsmAD_domain 214 284
No external refs found!