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  5. Solyc03g121590.3.1

Solyc03g121590.3.1 (RHD3, Solyc03g121590)


Aliases : RHD3, Solyc03g121590

Description : ER tubulae formation factor (RHD3/RL)


Gene families : OG0001619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121590.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271330 evm_27.TU.AmTr_v1... Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G13870 RHD3 Root hair defective 3 GTP-binding protein (RHD3) 0.06 OrthoFinder output from all 47 species
Adi_g021765 RHD3 ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g13381 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g18669 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g28147 RHD3 ER tubulae formation factor *(RHD3/RL) & original... 0.05 OrthoFinder output from all 47 species
Als_g33558 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.04 OrthoFinder output from all 47 species
Aop_g11220 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g17759 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g12043 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G037600.1 Ceric.05G037600 ER tubulae formation factor *(RHD3/RL) & original... 0.11 OrthoFinder output from all 47 species
Dcu_g51662 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01016855001 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Gb_41499 No alias ER tubulae formation factor (RHD3/RL) 0.04 OrthoFinder output from all 47 species
LOC_Os01g39310.1 RHD3, LOC_Os01g39310 ER tubulae formation factor (RHD3/RL) 0.07 OrthoFinder output from all 47 species
Len_g08736 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g04180 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.08 OrthoFinder output from all 47 species
MA_10428123g0010 RHD3 ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
MA_10428984g0020 RHD3 ER tubulae formation factor (RHD3/RL) 0.02 OrthoFinder output from all 47 species
Msp_g07707 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g18005 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g15405 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g18963 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Smo73603 RHD3 Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Spa_g05226 No alias ER tubulae formation factor *(RHD3/RL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e020502_P002 RHD3, Zm00001e020502 ER tubulae formation factor (RHD3/RL) 0.06 OrthoFinder output from all 47 species
Zm00001e027781_P001 RHD3, Zm00001e027781 ER tubulae formation factor (RHD3/RL) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 48 765
No external refs found!