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  5. Solyc03g118470.4.1

Solyc03g118470.4.1 (atnudt17, NUDT17,...)


Aliases : atnudt17, NUDT17, Solyc03g118470

Description : Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana (sp|q9zu95|nud17_arath : 185.0)


Gene families : OG0001213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001213_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc03g118470.4.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00096990 atnudt17,... Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G18300 NUDT4, atnudt4 nudix hydrolase homolog 4 0.12 OrthoFinder output from all 47 species
AT1G73540 atnudt21, NUDT21 nudix hydrolase homolog 21 0.12 OrthoFinder output from all 47 species
AT3G26690 ATNUDX13,... nudix hydrolase homolog 13 0.02 OrthoFinder output from all 47 species
Aspi01Gene44605.t1 atnudt16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008469001 atnudt17, NUDT17 Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.19 OrthoFinder output from all 47 species
GSVIVT01011668001 NUDT18, atnudt18 Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
LOC_Os02g50130.1 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g32740.1 NUDT12,... Nudix hydrolase 12, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g14420.1 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.21 OrthoFinder output from all 47 species
Lfl_g21758 atnudt16, NUDT16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431661g0020 atnudt16, NUDT16 Nudix hydrolase 16, mitochondrial OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g04113 atnudt16, NUDT16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43405 ATNUDX13,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10930 atnudt16, NUDT16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006121_P001 atnudt16,... Nudix hydrolase 16, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e015741_P001 NUDT18,... Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e036756_P001 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 53 159
No external refs found!