Solyc03g117820.1.1 (Solyc03g117820)

Aliases : Solyc03g117820

Description : component ADA1 of SAGA transcription co-activator complex

Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g117820.1.1

Target	Alias	Description	ECC score	Gene Family Method
Als_g26308	No alias	component *(ADA1) of SAGA transcription co-activator...	0.04	OrthoFinder output from all 47 species
Aop_g06522	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Dcu_g05456	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Ehy_g19414	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
GSVIVT01016065001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.06	OrthoFinder output from all 47 species
GSVIVT01037861001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
LOC_Os12g39090.2	LOC_Os12g39090	component ADA1 of SAGA transcription co-activator complex	0.03	OrthoFinder output from all 47 species
Lfl_g02173	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Zm00001e040647_P001	Zm00001e040647	component ADA1 of SAGA transcription co-activator complex	0.02	OrthoFinder output from all 47 species
Zm00001e041823_P001	Zm00001e041823	component ADA1 of SAGA transcription co-activator complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	5	332

External Links

No external refs found!