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  5. Solyc03g117020.4.1

Solyc03g117020.4.1 (SDF2, AtSDF2, ATSDL,...)


Aliases : SDF2, AtSDF2, ATSDL, Solyc03g117020

Description : component SDF2 of ERdj3B-BiP-SDF2 chaperone complex


Gene families : OG0002033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117020.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT2G25110 SDF2, AtSDF2, ATSDL stromal cell-derived factor 2-like protein precursor 0.1 OrthoFinder output from all 47 species
Adi_g109558 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044339 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.14 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.01 OrthoFinder output from all 47 species
Cre13.g571750 SDF2, AtSDF2, ATSDL Stromal cell-derived factor 2-like protein... 0.03 OrthoFinder output from all 47 species
Dac_g45547 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g21401 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os08g17680.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.02 OrthoFinder output from all 47 species
LOC_Os08g34190.1 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.09 OrthoFinder output from all 47 species
Len_g01083 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Mp7g08270.1 SDF2, AtSDF2, ATSDL component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.03 OrthoFinder output from all 47 species
Nbi_g34997 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.08 OrthoFinder output from all 47 species
Pir_g63811 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g02655 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006775 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Sam_g48817 No alias component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Spa_g17625 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.03 OrthoFinder output from all 47 species
Spa_g52416 SDF2, AtSDF2, ATSDL component *(SDF2) of ERdj3B-BiP-SDF2 chaperone complex &... 0.06 OrthoFinder output from all 47 species
Zm00001e004093_P001 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.03 OrthoFinder output from all 47 species
Zm00001e022473_P002 SDF2, AtSDF2,... component SDF2 of ERdj3B-BiP-SDF2 chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016093 MIR_motif 53 197
No external refs found!