1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g116720.3.1

Solyc03g116720.3.1 (HP6, AHP6, Solyc03g116720)


Aliases : HP6, AHP6, Solyc03g116720

Description : AHP-type cytokinin signal transducer


Gene families : OG0001008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001008_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116720.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G80100 HP6, AHP6 histidine phosphotransfer protein 6 0.06 OrthoFinder output from all 47 species
Aev_g30855 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55759.t1 AHP1, Aspi01Gene55759 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64811.t1 AHP1, Aspi01Gene64811 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26393 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38931 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G002600.1 AHP1, Ceric.33G002600 cytokinin signal transducer *(AHP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01034756001 No alias Phytohormones.cytokinin.perception and signal... 0.04 OrthoFinder output from all 47 species
LOC_Os08g44350.1 AHP1, LOC_Os08g44350 AHP-type cytokinin signal transducer 0.03 OrthoFinder output from all 47 species
MA_130008g0010 AHP5 AHP-type cytokinin signal transducer 0.02 OrthoFinder output from all 47 species
Nbi_g42090 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33354 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01145 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07368 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01546 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g32914 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13194 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35799 No alias cytokinin signal transducer *(AHP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g066350.2.1 AHP4, Solyc08g066350 AHP-type cytokinin signal transducer 0.03 OrthoFinder output from all 47 species
Spa_g09126 AHP1 cytokinin signal transducer *(AHP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g25275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008207 Sig_transdc_His_kin_Hpt_dom 47 104
No external refs found!