Solyc03g111250.3.1 (CHC1, Solyc03g111250)

Aliases : CHC1, Solyc03g111250

Description : component BAF60 of chromatin remodeling complex

Gene families : OG0004548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004548_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g111250.3.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g040515	CHC1	SMARCD component *(SWP73) of chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Aop_g05626	CHC1	SMARCD component *(SWP73) of chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Gb_09155	CHC1	component BAF60 of chromatin remodeling complex	0.02	OrthoFinder output from all 47 species
Tin_g03955	CHC1	SMARCD component *(SWP73) of chromaTin remodeling...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003121	SWIB_MDM2_domain	310	381

External Links

No external refs found!