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  5. Solyc03g097340.1.1

Solyc03g097340.1.1 (ATTTG1, TTG, TTG1,...)


Aliases : ATTTG1, TTG, TTG1, URM23, Solyc03g097340

Description : Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana (sp|q9xgn1|ttg1_arath : 536.0)


Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g097340.1.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00131380 LWD1, ATAN11,... Multi-process regulation.circadian clock.morning element... 0.1 OrthoFinder output from all 47 species
Gb_40146 LWD1, ATAN11 WD repeat-containing protein LWD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45810.1 ATTTG1, TTG,... Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Sam_g17895 No alias circadian clock activation factor *(LWD) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 258 293
IPR001680 WD40_repeat 172 203
No external refs found!