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  5. Solyc03g096730.3.1

Solyc03g096730.3.1 (EMB101, VTC1, SOZ1,...)


Aliases : EMB101, VTC1, SOZ1, CYT1, GMP1, Solyc03g096730

Description : GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose pyrophosphorylase (VTC1)


Gene families : OG0001826 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001826_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g096730.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00012130 EMB101, VTC1,... Probable mannose-1-phosphate guanylyltransferase 2... 0.03 OrthoFinder output from all 47 species
AT2G39770 EMB101, VTC1,... Glucose-1-phosphate adenylyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g077364 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Adi_g077365 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g21485 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g11094 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.07 OrthoFinder output from all 47 species
Als_g37499 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Als_g40009 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Als_g44004 EMB101, VTC1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52242 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aob_g02953 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aop_g10205 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Aspi01Gene25314.t1 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043509 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Cba_g15086 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Cba_g45895 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ceric.03G094900.1 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Dac_g37624 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Dcu_g13640 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Dde_g05774 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01016470001 EMB101, VTC1,... Redox homeostasis.low-molecular-weight... 0.03 OrthoFinder output from all 47 species
Gb_41514 EMB101, VTC1,... GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.03 OrthoFinder output from all 47 species
Len_g13371 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Lfl_g06938 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Mp6g04750.1 EMB101, VTC1,... GDP-D-mannose pyrophosphorylase (VTC1). GDP-D-mannose... 0.04 OrthoFinder output from all 47 species
Ore_g15629 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Pir_g03043 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sam_g08425 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Smo168373 EMB101, VTC1,... Redox homeostasis.low-molecular-weight... 0.04 OrthoFinder output from all 47 species
Spa_g38101 EMB101, VTC1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001451 Hexapep 260 295
IPR005835 NTP_transferase_dom 2 229
No external refs found!