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  5. Solyc03g095710.4.1

Solyc03g095710.4.1 (AMY1, ATAMY1, Solyc03g095710)


Aliases : AMY1, ATAMY1, Solyc03g095710

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g095710.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G25000 AMY1, ATAMY1 alpha-amylase-like 0.06 OrthoFinder output from all 47 species
Als_g38642 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g33040.1 AMY2, ATAMY2,... alpha amylase 0.04 OrthoFinder output from all 47 species
LOC_Os06g49970.2 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Sam_g16056 No alias alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 60 216
IPR012850 A-amylase_bs_C 371 429
No external refs found!