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Aliases : Solyc03g082590
Description : RAB-GTPase-activating protein (RAB-GAP)
Gene families : OG0001800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001800_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g082590.4.1 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00027p00080950 | evm_27.TU.AmTr_v1... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G53570 | No alias | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22874 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene21866.t1 | Aspi01Gene21866 | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71594 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G024000.1 | Ceric.36G024000 | Rab GTPase-activating protein & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25695 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16469 | No alias | Rab GTPase-activating protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g27537 | No alias | Rab GTPase-activating protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09071 | No alias | Rab GTPase-activating protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23369 | No alias | Rab GTPase-activaTing protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010215_P001 | Zm00001e010215 | RAB-GTPase-activating protein (RAB-GAP) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000195 | Rab-GTPase-TBC_dom | 315 | 436 |
| No external refs found! |