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  5. Solyc03g031700.4.1

Solyc03g031700.4.1 (ATNAP1, ATABC1, ABC1,...)


Aliases : ATNAP1, ATABC1, ABC1, LAF6, Solyc03g031700

Description : component SUF-B of plastidial SUF system assembly phase


Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g031700.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G04770 ATNAP1, ATABC1,... ATP binding cassette protein 1 0.09 OrthoFinder output from all 47 species
Ala_g02055 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Aop_g04268 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Cba_g08367 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Ceric.24G058200.1 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Cre15.g643600 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
Dcu_g37720 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Ore_g09293 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Sam_g17039 No alias component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Zm00001e019397_P001 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000825 SUF_FeS_clus_asmbl_SufBD 286 519
No external refs found!