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  5. Solyc03g026060.3.1

Solyc03g026060.3.1 (XBAT33, Solyc03g026060)


Aliases : XBAT33, Solyc03g026060

Description : RING-HC-class E3 ligase


Gene families : OG0001806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g026060.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00056230 XBAT33,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g37996 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015919 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: CDS=333-1826 0.04 OrthoFinder output from all 47 species
Cre06.g287650 XBAT33 Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Ehy_g09186 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09647 No alias E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002137_P001 XBAT33, Zm00001e002137 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023720_P001 XBAT32, Zm00001e023720 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 178 208
IPR020683 DUF3447 49 132
IPR020683 DUF3447 220 266
No external refs found!