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  5. Solyc03g025440.3.1

Solyc03g025440.3.1 (Solyc03g025440)


Aliases : Solyc03g025440

Description : C2H2 zinc finger transcription factor


Gene families : OG0001413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g025440.3.1

Target Alias Description ECC score Gene Family Method Actions
Als_g04479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12539.t1 Aspi01Gene12539 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38877.t1 Aspi01Gene38877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439488 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!