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  5. Solyc03g007260.3.1

Solyc03g007260.3.1 (ATCNGC1, CNGC1, Solyc03g007260)


Aliases : ATCNGC1, CNGC1, Solyc03g007260

Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007260.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.01 OrthoFinder output from all 47 species
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.01 OrthoFinder output from all 47 species
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.03 OrthoFinder output from all 47 species
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 OrthoFinder output from all 47 species
Adi_g115311 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g12299 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene46957.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Azfi_s0164.g054260 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g13656 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g14388 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55080.1 ATCNGC6, CNGC6,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Len_g23962 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Msp_g24602 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Msp_g26583 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Nbi_g01203 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Nbi_g01306 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Nbi_g06765 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Nbi_g09414 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Pir_g02834 ATCNGC14, CNGC14 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Pir_g11777 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Pir_g12194 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.01 OrthoFinder output from all 47 species
Pir_g52371 CNGC5, ATCNGC5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021222 ATCNGC20, CNGC20, CNBT1 phytochrome photoreceptor *(PHY) & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g11868 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc03g116850.3.1 ATCNGC8, CNGC8,... cyclic nucleotide-gated cation channel (CNGC) 0.01 OrthoFinder output from all 47 species
Zm00001e006772_P003 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.01 OrthoFinder output from all 47 species
Zm00001e016088_P002 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e034885_P002 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 396
No external refs found!