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  5. Solyc03g007010.4.1

Solyc03g007010.4.1 (PRH75, Solyc03g007010)


Aliases : PRH75, Solyc03g007010

Description : DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea (sp|q41382|rh7_spiol : 714.0)


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007010.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00127820 PMH2, ATRH53,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Adi_g054902 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107957 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14243 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14234 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08480 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013637 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Cba_g01233 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08101 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08211 PRH75 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06681 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38604 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_17924g0010 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g10755 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07399 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10670 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03917 PRH75 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26329 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Spa_g08414 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Tin_g13858 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15128 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 360 458
IPR011545 DEAD/DEAH_box_helicase_dom 137 314
IPR012562 GUCT 547 641
No external refs found!